Theses

Main content

PhD Theses

2015

Ottoz D (2015) A synthetic approach to study function and expression of the Saccharomyces cerevisiae RNA helicase Ded1. doi:10.3929/ethz-a-010603399

Gnuegge R (2015) Engineering of synthetic gene regulatory networks in Saccharomyces cerevisiae. doi:10.3929/ethz-a-010603388

2014

Lang M (2014) Modular Identification and Analysis of Biomolecular Networks. doi:10.3929/ethz-a-010388689

2013

Sunnåker MA (2013) Computational methods for automated construction and analysis of dynamical models of biochemical systems. doi:10.3929/ethz-a-010008371

Mayer C (2013) A rule-based modeling framework for automatic generation of reaction networks. doi:10.3929/ethz-a-009787677

Dimopoulos S (2013) Automatic single cell analysis of microscopy images. doi:10.3929/ethz-a-009915318

2012

Ganter M (2012) Concepts and methods for the automated reconstruction of genome-scale metabolic network models. doi:10.3929/ethz-a-007604552

Uhr M (2012) Structural analysis of inference problems arising in systems biology. doi:10.3929/ethz-a-007161203

2009

Terzer M (2009) Large scale methods to enumerate extreme rays and elementary modes. doi:10.3929/ethz-a-005945733, Book at Lulu: B/W, Color

Master Theses

2013

Tian C (2013) Extending Network Motifs By Monotone Systems. Eidgenössische Technische Hochschule Zürich, Department of Computer Science.

Widmer L (2013) Stochastic Approximations in Computational Modeling of Cry1 Knockout SCN Neurons in the Mammalian Circadian Clock. Eidgenössische Technische Hochschule Zürich, Department of Computer Science.

Kumar SKS (2013) Implementation of a Closed-loop Microscopy Pipeline to Stitch and Segment Images of Growing Cell Populations. Eidgenössische Technische Hochschule Zürich, Department of Computer Science. doi:10.3929/ethz-a-009935780

Vainorius G (2013) Characterization of an inducible protein degradation system in budding yeast. Eidgenössische Technische Hochschule Zürich, Department of Biosystems Science and Engineering.

2012

Kuzmanovska I (2012) Markov chain Monte Carlo methods in biological mechanistic models. Eidgenössische Technische Hochschule Zürich, Department of Computer Science. doi:10.3929/ethz-a-007343293

Nordt J (2012) Algorithms for proposing and evaluating candidate reactions in genome-scale metabolic networks. Eidgenössische Technische Hochschule Zürich, Department of Computer Science.

2011

Constantinescu S (2011) Monotone Modules Approximation. Eidgenössische Technische Hochschule Zürich, Department of Computer Science. doi:10.3929/ethz-a-006686941

Gander R (2011) Level Set Method in n Dimensions for C++. Eidgenössische Technische Hochschule Zürich, Department of Mathematics.

Liphardt T (2011) Structural Analysis of Translation Initiation Sites. Eidgenössische Technische Hochschule Zürich, Department of Computer Science.

Brunner S (2011) The small molecule-binding transcription factors Crp and Cra drive metabolic adaptation in Escherichia coli. Eidgenössische Technische Hochschule Zürich, Department of Biology.

2010

Said A (2010) Quantifying systems drift between species: The divergence of paralogous genes between human and mouse. Eidgenössische Technische Hochschule Zürich, Department of Computer Science.

Whitehead E (2010) Boolean gates design with eukaryotic composable parts. Eidgenössische Technische Hochschule Zürich, Department of Computer Science.

Bongers M (2010) Metabolic response of S. cerevisiae to perturbation of single enzyme abundance. Eidgenössische Technische Hochschule Zürich, Department of Biology.

2009

Krier I (2009) Dynamic modeling of the TOR signaling pathway in yeast. EPFL, Department of Biology.

Schläpfer P (2009) Flux balance analysis of Arabidopsis thaliana. Eidgenössische Technische Hochschule Zürich, Department of Biology.

Lang M (2009) Entrainment and Synchronization of Synthetic Mammalian Oscillators. University of Stuttgart, Institute for Systems Theory and Automatic Control (IST).

2008

Denervaud N (2008) A mammalian synthetic oscillator based on small interfering RNA. EPFL, Department of Biology.

2007

De Mayo N (2007) Applications of cellular automata to biological problems. Eidgenössische Technische Hochschule Zürich, Department of Computer Science.

Nikolayeva O (2007) Synthetic genetic circuit with XOR function. Eidgenössische Technische Hochschule Zürich, Department of Electrical Engineering.

Nart J (2007) Enzyme kinetic modeling of polyubiquitin chain binding to shuttle protein HHR23A. Eidgenössische Technische Hochschule Zürich, Department of Mathematics.

2006

Franjcic Z (2006) Robustness analysis of biological oscillators. Eidgenössische Technische Hochschule Zürich, Department of Computer Science.

 
 
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